CV page

Amrei Binzer-Panchal

Amrei Binzer-Panchal
Director and coordinator of the SLU Bioinformatics Infrastructure (SLUBI).

Presentation

Amrei is the director and coordinator of SLUBI, an infrastructure that provides support and training in bioinformatics for researchers at SLU. She is also a bioinformatician involved in various projects around SLU.

Teaching

Amrei participates in SLUs bioinformatics introduction course and will teach diverse bioinformatics training sessions.

Background

Since August 2021           Researcher and SLU Bioinformatics Infrastructure's director and coordinator, Swedish University of Agricultural Sciences, Department of Animal Breeding and Genetics, Uppsala, Sweden.

2019 - 2021           Bioinformatician, Clinical Genetics, Department of Molecular Medicine and Surgery, Karolinska Institutet

2017 - 2019           Bioinformatician, Array and Analysis Platform, Department for Medical Sciences, Uppsala University 

2014 - 2016           Postdoctoral fellow, Theoretical Biology, Department of Physics, Chemistry and Biology, Linköping University

2013 - 2014           Postdoctoral fellow, Max Planck Institute for Evolutionary Biology, Plön, Germany 

2009 - 2013           PhD in Theoretical Biology, Georg-August-University Göttingen, Germany 

 

Selected publications

Marina Solé, Michela Ablondi, Amrei Binzer-Panchal, Brandon D. Velie, Nina Hollfelder, Nadine Buys, Bart J. Ducro, Liesbeth Francois, Steven Janssens, Anouk Schurink,  Åsa Viklund, Susanne Eriksson, Anders Isaksson, Hanna Kultima, Sofia Mikko, Gabriella Lindgren (2019): Inter- and intra-breed genome-wide copy number diversity in a large cohort of European equine breeds, BMC Genomics, 20, 759.

Amrei Binzer-Panchal, Elin Hardell, Björn Viklund, Mehran Ghaderi, Tjalling Bosse, Marisa Nucci, Cheng-Han Lee, Nina Hollfelder, Pádraic Corcoran, Jordi Gonzalez-Molina, Lidia Moyano-Galceran, Debra Bell, John Schoolmeester, Anna Masback, Gunnar Kristensen, Ben Davidson, Kaisa Lehti, Anders Isaksson, Joseph Carlson (2019): Integrated Molecular Analysis of Undifferentiated Uterine Sarcomas Reveals Clinically Relevant Molecular Subtypes, Clinical Cancer Research, 25(7):2155-2165.

Arnaud Sentis, Amrei Binzer, David S. Boukal (2017): Temperature-size responses alter food chain persistence across environmental gradients, Ecology Letters, 20(7): 852-862.

Amrei Binzer, Christian Guill, Björn C. Rall, Ulrich Brose (2015): Interactive effects of warming, eutrophication and size structure: impacts on biodiversity and food-web structure, Global Change Biology, 22(1): 220–227.